my buddie has a 400ex and so do i he had the same problem, and after some research we found out that it was most likley a blown bearing holding the cam down at the top of the head. is it a clicky rattle or more like just from vibration?
i have the same problem. i just got a brand new 2008 400ex and the first time i rode it there was a buzzing noise, still cant figure out what it is but sounds like its coming from somewhere upfront